CDS

Accession Number TCMCG017C05790
gbkey CDS
Protein Id OMP07407.1
Location join(5560..5609,6263..6429,6514..6554,7092..7196,7317..7396,8285..8454,8954..9038,9502..9592)
GeneID InterPro:IPR008676
Organism Corchorus olitorius
locus_tag COLO4_07366

Protein

Length 262aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013255.1
Definition MRG family protein [Corchorus olitorius]
Locus_tag COLO4_07366

EGGNOG-MAPPER Annotation

COG_category BK
Description nuA4 complex subunit EAF3 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K11339        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000123        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006473        [VIEW IN EMBL-EBI]
GO:0006475        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016573        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0018393        [VIEW IN EMBL-EBI]
GO:0018394        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031248        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0035267        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0040034        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043189        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043543        [VIEW IN EMBL-EBI]
GO:0043967        [VIEW IN EMBL-EBI]
GO:0043968        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048506        [VIEW IN EMBL-EBI]
GO:0048509        [VIEW IN EMBL-EBI]
GO:0048510        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902493        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902562        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990188        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCGGATTTGAAACTACTCCATGTTCTTACCGGAGCAATAATTCACGCTGGGATGAATGGGTAGGTATTGATAGATTAATGAAAGATACAGAAGAGAATAGACAGAAGCAGGAAGCGCTTGGCAAGAAATTGGAGGAAGAAAATAAGACTGAACTTCGTCCTACAAAGAGAGGAACTGGGCGTGTCTTTCACCATAAGCTTAGACATCCTAAAGGTAGTAGGGGCAAAAGGCGAAAGAGTGATTCTAGCAACAAGGAGAAGAGCACTGTACCTTCAGAAAAGCTTGTGAATGTCCAAATTCCACTAACTTTGAAGAAGCAATTAGTTGATGACTTTGAATTTGTTACTCATTTGGGAAAGCTTGTTAAACTTCCACGTTCTCCGAATGTGGAAGACATAGTGAAGATGTATCTTGAATATAGATCTAAGAAAGATGGCATGGTAACAGATTCAGTTCAAGAAATTGTTAAAGGGATTCGTGCGTACTTCAACAGAGCATTGCCCATGATGCTTTTGTACAAAAATGAGCGTCAACAGTATGAGGATACTGTTACAGATAATATTCGTCCATCCACAGTATATGGTGCAGAACATCTACTGCGTCTCTTTGTTAAGTTGCCTGAGTTATTGGTGCGTGCAGACATTGAAGAGGAGACATTATTGGAATTGCAGCAAGAATTAGTCGATTTTCTCAAGTTCCTGCAGAAGAATCAGAATTCCTTATTTCTCTCTACATACCATATTGCAGAAGATGTTGAGACCAGCACCAATGAACAAAAGCATTAA
Protein:  
MSGFETTPCSYRSNNSRWDEWVGIDRLMKDTEENRQKQEALGKKLEEENKTELRPTKRGTGRVFHHKLRHPKGSRGKRRKSDSSNKEKSTVPSEKLVNVQIPLTLKKQLVDDFEFVTHLGKLVKLPRSPNVEDIVKMYLEYRSKKDGMVTDSVQEIVKGIRAYFNRALPMMLLYKNERQQYEDTVTDNIRPSTVYGAEHLLRLFVKLPELLVRADIEEETLLELQQELVDFLKFLQKNQNSLFLSTYHIAEDVETSTNEQKH